NHi-C
1
Introduction
2
Figure1
2.1
Fig.1b-f were produced by Juicebox (
https://github.com/aidenlab/Juicebox
)
3
Figure2
3.1
Fig.2a,2f,2g,2i,2j were produced by Juicebox (
https://github.com/aidenlab/Juicebox
) with bigwig and bed files.
3.2
Fig.2n
4
Figure3
4.1
Fig.3a
4.2
Fig.3b
4.3
Fig.3c
4.4
Fig.3d
4.5
Fig.3f
4.6
Fig.3h
5
Figure4
5.1
Fig.4a
5.2
Fig.4b
5.3
Fig.4c
5.4
Fig.4d
5.5
Fig.4e
5.6
Fig.4f
5.7
Fig.4g
5.8
Fig.4i
6
Figure5
6.1
Fig.5a
6.2
Fig.5b
6.3
Fig.5c
6.4
Fig.5d-e were produced by Juicebox (
https://github.com/aidenlab/Juicebox
)
7
Figure6
7.1
Fig.6a
7.2
Fig.6b,6e were produced by deeptools (
https://github.com/deeptools/deepTools
) with bigwig files.
7.3
Fig.6c
8
Figure7
8.1
Fig.7b
8.2
Fig.7c
8.3
Fig.7d
8.4
Fig.7h
9
Figure8
9.1
Fig.8 is designed by ourself in Adobe Illustrator
Published with bookdown
Analysis scripts for NHi-C
2
Figure1
2.1
Fig.1b-f were produced by Juicebox (
https://github.com/aidenlab/Juicebox
)
knitr
::
include_graphics
(
"img/Fig.1b-f.png"
)
